Atomic Structure
Everything else in chemistry depends on how atoms are built and how their electrons are arranged. This chapter builds the atom from its particles, arranges its electrons in shells and orbitals, and ends with the energy needed to remove them.
Learning objectives
By the end of this chapter, you can:
- state the relative charge, mass and location of protons, neutrons and electrons
- deduce the particles in atoms and ions and write nuclide notation
- define isotopes and state how they differ
- deduce how beams of charged particles deflect in an electric field
- describe the shapes and relative energies of s, p and d orbitals
- write electronic configurations of atoms and ions up to 4s
- explain the factors that affect ionisation energy and the dips across a period
- read successive ionisation energies to find the group
2.1The atom
An atom is the smallest particle of an element that still has the element's chemical properties. It is built from three sub-atomic particles. Protons and neutrons, together called nucleons, sit in the tiny central nucleus. Electrons move around it in shells (Figure 2.1).
| particle | relative charge | relative mass | location |
|---|---|---|---|
| proton | +1 | 1 | nucleus |
| neutron | 0 | 1 | nucleus |
| electron | −1 | about 1/1836 | electron shells |
- An atom is electrically neutral: number of protons = number of electrons.
- The nucleus holds almost all the mass and all the positive charge. Electrons are held by the electrostatic attraction of the protons.
- The atom's radius is at least 100 000 times the radius of its nucleus. If the nucleus were a 1 cm marble, the atom would be about 1 km across, so an atom is mostly empty space.
2.1.1Proton number, nucleon number and ions
So the number of neutrons is A − Z. Nuclide notation writes A at the top left and Z at the bottom left of the symbol (Figure 2.2). An ion forms when an atom gains or loses electrons. Its protons and neutrons do not change. Each electron lost adds +1 to the charge and each electron gained adds −1. A positive ion is a cation and a negative ion is an anion. Particles with the same number of electrons, such as Na+, Ne and F−, are isoelectronic.
Worked exampleHow many protons, neutrons and electrons are in an atom of tungsten-184, 18474W, and in a calcium ion, 4020Ca2+?
2.1.2Isotopes
| hydrogen-1 | hydrogen-2 | hydrogen-3 | |
|---|---|---|---|
| protons | 1 | 1 | 1 |
| neutrons | 0 | 1 | 2 |
| electrons | 1 | 1 | 1 |
| nucleon number | 1 | 2 | 3 |
Isotopes have the same number of electrons, so they have the same electronic configuration and the same chemical reactions, because chemical reactions involve electrons and not the nucleus. Their masses differ, so their physical properties, such as density, melting point, boiling point and rate of diffusion, differ. Name an isotope by its element and nucleon number, as in chlorine-35, 35Cl or 21H (Figure 2.3).
- How many protons, neutrons and electrons are in the sulfide ion, 3216S2−?
- Why do isotopes of an element react in the same way but differ in density?
2.1.3Charged particles in an electric field Core · A Level
A beam of protons or electrons bends in an electric field, because they are charged. Neutrons carry no charge and go straight on. A positive particle bends towards the negative plate. A negative particle bends towards the positive plate (Figure 2.4).
An electron has the same size of charge as a proton but about 1/1836 of the mass, so its charge ÷ mass is far larger and it bends much more. Inside the field the path is curved. After the plates the beam travels in a straight line, and the angle is measured between this line and the original direction.
Worked exampleA beam of 241Am+ ions is deflected +2° in an electric field. Under the same conditions, by what angle is a beam of 32S− ions deflected?
- A beam of 1H+ ions is deflected +4°. What is the deflection of a beam of 2H+ ions under the same conditions?
- Which beam bends more in the same field: 16O2− or 32S2−? Explain.
2.2Electrons in atoms
2.2.1Shells
Electrons occupy shells at different distances from the nucleus. The inner shells have the lowest energy and fill first. For the first 20 elements, the first shell holds up to 2 electrons and the second and third shells up to 8 each. This gives the electronic configuration: sodium is 2.8.1 and potassium is 2.8.8.1.
The Periodic Table lists the elements in order of proton number (Figure 2.5). Its rows are periods and its columns are groups, numbered 1 to 18. Groups 3 to 12 begin only in Period 4.
- The outer shell is the valence shell, and its electrons are valence electrons. A full valence shell is stable, which is why the noble gases are unreactive.
- Period number = number of occupied shells. For Groups 1 and 2, group number = valence electrons. For Groups 13 to 18, valence electrons = group number − 10. Helium has 2.
- Elements in the same group have the same number of valence electrons and so similar chemical properties.
This 2.8.8 pattern breaks down after calcium. The finer description below explains why, and is what A Level and the olympiad use.
2.2.2Subshells and orbitals Core · A Level
Each shell is a principal quantum shell, numbered n = 1, 2, 3, 4. Shell n is made of subshells, and each subshell is made of orbitals.
An electron has no fixed path. Marking its position again and again builds a cloud that is dense near the nucleus and thins out further away. The orbital is the region that contains most of that cloud.
| shell n | subshells | orbitals | maximum electrons |
|---|---|---|---|
| 1 | 1s | 1 | 2 |
| 2 | 2s, 2p | 1 + 3 = 4 | 8 |
| 3 | 3s, 3p, 3d | 1 + 3 + 5 = 9 | 18 |
| 4 | 4s, 4p, 4d, 4f | 16 | 32 |
An s subshell has 1 orbital, a p subshell 3 and a d subshell 5. Shell n holds up to 2n2 electrons. The 4f subshell is not needed in this course.
Energies. Energy rises with n: 1s < 2s < 3s < 4s. Within a shell the order is s < p < d. Orbitals in the same subshell have the same energy and are called degenerate. The levels crowd together as n increases, so the 4s orbital is lower in energy than 3d and fills first (Figure 2.6).
Shapes. An s orbital is a sphere. A p orbital is a dumb-bell, and the three p orbitals point along the x, y and z axes. Of the five d orbitals, dx²−y² and dz² point along the axes, and dxy, dxz and dyz point between the axes (Figure 2.7). Four of the d orbitals have four lobes. The dz² orbital has two lobes and a ring around its middle. Orbitals of the same type get larger as n increases.
2.2.3Writing electronic configurations Core · A Level
Fill the orbitals of an atom in its ground state, the state with every electron in the lowest available energy level, using three rules.
- Aufbau principle: an electron goes into the empty orbital of lowest energy first. After 3p, the 4s orbital fills before 3d.
- Hund's rule: in a subshell, orbitals fill singly first, with parallel spins, before any pairs form. This keeps repulsion between electrons low.
- Pauli exclusion principle: an orbital holds at most 2 electrons, and they must have opposite spins.
Write each subshell with its number of electrons as a superscript, in order of increasing n (so 3d comes before 4s). Oxygen is 1s2 2s2 2p4: the 2 in 2p is the shell, the p is the subshell and the 4 is the number of electrons. The same configuration is drawn as boxes, with a box for each orbital and a half arrow for each electron (Figure 2.8). Label the boxes with the subshell only.
A shorter form shows the inner electrons as the symbol of the previous noble gas, as in bromine, [Ar] 3d10 4s2 4p5. The position in the Periodic Table also shows the last subshell filled. Sodium is in Period 3 and the s block, so it ends 3s1. Phosphorus is the third element of the p block in Period 3, so it ends 3p3.
2.2.4Chromium and copper
Chromium and copper break the pattern. Cr is [Ar] 3d5 4s1 and Cu is [Ar] 3d10 4s1. A half-filled or full 3d subshell is more stable than 3d⁴ 4s² or 3d⁹ 4s², and 3d and 4s are so close in energy that moving one electron costs little (Figure 2.9).
2.2.5Ions
Write the atom's configuration first. For a cation, remove electrons from the outermost shell, taking them from 4s before 3d. For an anion, add electrons to the empty or part-filled valence orbitals. This is the trap: 4s fills first but also empties first, because once 3d holds electrons, 4s (n = 4) is the outermost shell (Figure 2.10).
Worked exampleWrite the electronic configuration of (a) S2−, (b) Fe2+, (c) Fe3+.
- Write the full electronic configuration of the calcium ion, Ca2+.
- How many unpaired electrons are in a nitrogen atom, and in an oxygen atom?
- Explain why the configuration of chromium is 3d⁵ 4s¹ and not 3d⁴ 4s².
- Which element has the ground state valence configuration 4s² 4p⁴?
2.3Ionisation energy Core · A Level
The second ionisation energy removes an electron from X+(g) to give X2+(g), and so on. Every ionisation energy is positive (endothermic: energy is taken in) because energy is needed to pull the electron away from the nucleus. Gaseous atoms are far apart, so the energy measured is only that of removing the electron. The (g) after each formula is a state symbol meaning gas, and it is part of the equation.
2.3.1Trends in first ionisation energy
Three factors decide how strongly the outer electron is held: the nuclear charge, the shielding by inner shells, and the distance from the nucleus. Inner electrons repel the outer electron and cancel part of the pull of the nucleus. What is left is the effective nuclear charge, Zeff = Z − shielding. Electrons in the same shell shield each other very little (Figure 2.11).
- Across a period, the first ionisation energy generally increases. Nuclear charge rises while the electrons enter the same shell, so shielding stays about the same, the effective nuclear charge rises and the atom shrinks. The outer electron is held more strongly, so more energy is needed to remove it.
- Down a group, it decreases. The atom has more shells, so the outer electron is further out and more shielded. This largely cancels the rise in nuclear charge, so the outer electron is held more weakly and less energy is needed.
In an answer, state the effect on the attraction and then on the energy required. Figure 2.12 shows the pattern for the first 20 elements. Two small dips interrupt the rise across Periods 2 and 3.
| dip | values (kJ mol−1) | reason |
|---|---|---|
| Mg to Al (and Be to B) | 736 then 577 | Al's outer electron is in a 3p orbital, higher in energy and less strongly attracted than Mg's 3s electron, so less energy is needed. |
| P to S (and N to O) | 1060 then 1000 | S loses a paired 3p electron. The repulsion between the two electrons in one orbital makes it easier to remove than P's unpaired 3p electron. |
B
O
2.3.2Successive ionisation energies
Successive ionisation energies always increase. The number of protons stays the same while the number of electrons falls, so each remaining electron is held more strongly. The size of each step shows the shell structure (Figure 2.14).
- Gradual increase: the electrons removed come from the same subshell.
- Small jump: the next electron comes from a subshell of lower energy in the same shell, for example from s after p.
- Big jump: the next electron comes from an inner shell, which is much closer to the nucleus, less shielded and held much more strongly.
The big jump gives the group. The number of electrons removed before it equals the valence electrons.
Worked exampleThe first seven ionisation energies of element X in kJ mol−1 are 870, 1800, 3000, 3600, 5800, 7000 and 13 000. State the group of X, giving a reason.
- The first seven ionisation energies of element J in kJ mol−1 are 1020, 1950, 2730, 4580, 6020, 12 300 and 15 400. Which group is J in?
- Explain why the second ionisation energy of sodium is much greater than its first.
- Explain why the first ionisation energy of aluminium is lower than that of magnesium.
Answers to Check your understanding
2.1
- 16 protons, 32 − 16 = 16 neutrons and 16 + 2 = 18 electrons.
- Isotopes have the same number of electrons, so they react in the same way. They have different numbers of neutrons, so their masses differ, and with them their physical properties such as density.
- The angle is proportional to charge ÷ mass. Charge is unchanged and the mass doubles, so the angle halves to +2°.
- O2− bends more. Both have charge −2, and the mass of 16 is less than 32, so charge ÷ mass is larger for oxygen.
2.2
- Ca is 1s² 2s² 2p⁶ 3s² 3p⁶ 4s². Remove both 4s electrons: Ca2+ is 1s² 2s² 2p⁶ 3s² 3p⁶.
- Nitrogen has 3, one in each 2p orbital. Oxygen has 2, because the fourth 2p electron pairs up.
- A half-filled 3d subshell with one electron in 4s is more stable than 3d⁴ 4s², and 3d and 4s are close in energy.
- Selenium. The valence configuration 4s² 4p⁴ is in Period 4 and Group 16.
2.3
- The big jump is between the 5th and 6th, so J has 5 valence electrons and is in Group 15.
- The first electron comes from the outer 3s subshell. The second must be removed from the inner 2p subshell of Na+, which is closer to the nucleus and more strongly attracted.
- The electron lost by Al is a 3p electron, higher in energy and less strongly attracted to the nucleus than Mg's 3s electron, so less energy is needed.